STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP25857.1Hypothetical protein; Psort location: Extracellular, score:8.82. (37 aa)    
Predicted Functional Partners:
EDP25858.1
Acetyltransferase, GNAT family; KEGG: tcr:511671.70 1.6e-07 acetyltransferase K00621; COG: COG0454 Histone acetyltransferase HPA2 and related acetyltransferases; Psort location: Cytoplasmic, score:8.87.
       0.746
EDP25859.1
Hypothetical protein; Psort location: Cytoplasmic, score:8.87.
       0.563
EDP25856.1
MATE domain protein; COG: COG0534 Na+-driven multidrug efflux pump; Psort location: CytoplasmicMembrane, score:9.99.
       0.514
EDP25860.1
YbaK/proline--tRNA ligase associated domain protein; KEGG: bli:BL01235 5.6e-07 proS; prolyl-tRNA synthetase K01881; COG: COG2606 Uncharacterized conserved protein; Psort location: Cytoplasmic, score:8.87.
       0.442
EDP25861.1
Hypothetical protein; KEGG: pmn:PMN2A_0920 4.5e-09 ribonuclease Z K00784; COG: COG1234 Metal-dependent hydrolases of the beta-lactamase superfamily III; Psort location: Cytoplasmic, score:8.87.
       0.416
Your Current Organism:
Coprococcus eutactus
NCBI taxonomy Id: 411474
Other names: C. eutactus ATCC 27759, Coprococcus eutactus ATCC 27759
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.