STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP25543.1Transcriptional regulator, LuxR family; Psort location: Cytoplasmic, score:8.87. (335 aa)    
Predicted Functional Partners:
EDP26783.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: tcx:Tcr_0066 4.6e-71 periplasmic sensor hybrid histidine kinase K07678; COG: COG0642 Signal transduction histidine kinase; Psort location: CytoplasmicMembrane, score:10.00.
  
 0.966
EDP26794.1
PAS domain S-box protein; KEGG: mma:MM0260 1.8e-14 putative sensory transduction protein kinase; COG: COG2202 FOG: PAS/PAC domain; Psort location: Cytoplasmic, score:8.87.
  
 0.951
EDP25561.1
Diguanylate cyclase (GGDEF) domain protein; KEGG: ava:Ava_1777 6.3e-30 metal dependent phosphohydrolase, HD region with response regulator receiver modulation K07814; COG: COG3437 Response regulator containing a CheY-like receiver domain and an HD-GYP domain; Psort location: CytoplasmicMembrane, score:7.63.
  
 0.937
EDP27295.1
HD domain protein; KEGG: ava:Ava_1777 5.1e-41 metal dependent phosphohydrolase, HD region with response regulator receiver modulation K07814; COG: COG3437 Response regulator containing a CheY-like receiver domain and an HD-GYP domain; Psort location: Cytoplasmic, score:8.87.
  
 0.904
EDP26982.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: syn:slr2104 4.6e-64 hik22; two-component hybrid histidine kinase K02486; COG: COG0642 Signal transduction histidine kinase; Psort location: CytoplasmicMembrane, score:9.83.
  
 0.898
EDP27296.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: vfi:VF1296 1.0e-50 luxQ; sensor protein LuxQ; COG: COG0642 Signal transduction histidine kinase; Psort location: CytoplasmicMembrane, score:9.49.
  
 0.898
EDP27222.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: gme:Gmet_2694 2.6e-56 PAS/PAC sensor signal transduction histidine kinase K07636; COG: COG0642 Signal transduction histidine kinase; Psort location: CytoplasmicMembrane, score:9.70.
  
 0.890
EDP25190.1
Cyclic diguanylate phosphodiesterase (EAL) domain protein; KEGG: shn:Shewana3_3829 1.1e-44 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) K01745; COG: COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain; Psort location: Cytoplasmic, score:8.87.
  
 0.809
EDP25628.1
Diguanylate cyclase (GGDEF) domain protein; KEGG: syn:sll1687 2.7e-17 hik17; hypothetical protein; COG: COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain; Psort location: Cytoplasmic, score:8.87.
  
 
  0.680
EDP26684.1
Hypothetical protein; KEGG: tte:TTE1682 6.3e-16 baeS8; sensory transduction histidine kinases K07777; COG: COG4585 Signal transduction histidine kinase.
  
 0.632
Your Current Organism:
Coprococcus eutactus
NCBI taxonomy Id: 411474
Other names: C. eutactus ATCC 27759, Coprococcus eutactus ATCC 27759
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