Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EDP25409.1DNA-binding helix-turn-helix protein; COG: NOG36365 non supervised orthologous group; Psort location: Cytoplasmic, score:8.87. (70 aa)    
Predicted Functional Partners:
EDP25410.1
HipA domain protein; COG: COG3550 Uncharacterized protein related to capsule biosynthesis enzymes; Psort location: Cytoplasmic, score:8.87.
 
    0.948
EDP25641.1
DNA-binding helix-turn-helix protein; COG: COG1396 Predicted transcriptional regulators.
  
     0.645
EDP25411.1
Hypothetical protein.
       0.639
EDP25412.1
KEGG: efa:EF1922 0.00024 transcriptional regulator, LacI family/carbohydrate kinase, PfkB family protein K00852; COG: COG1609 Transcriptional regulators.
       0.639
EDP24885.1
Hypothetical protein; Psort location: Cytoplasmic, score:8.87.
  
     0.490
EDP25414.1
KEGG: shn:Shewana3_3435 9.9e-22 transcriptional regulator, LysR family K06022; COG: COG0583 Transcriptional regulator; Psort location: Cytoplasmic, score:9.98; Belongs to the LysR transcriptional regulatory family.
  
    0.478
EDP25413.1
Hypothetical protein; COG: NOG32695 non supervised orthologous group; Psort location: Cytoplasmic, score:8.87.
       0.473
EDP27168.1
DNA-binding helix-turn-helix protein; Psort location: Cytoplasmic, score:8.87.
  
     0.449
EDP27461.1
Hypothetical protein; Psort location: Cytoplasmic, score:8.87.
  
     0.425
Your Current Organism:
Coprococcus eutactus
NCBI taxonomy Id: 411474
Other names: C. eutactus ATCC 27759, Coprococcus eutactus ATCC 27759
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