Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDP25413.1Hypothetical protein; COG: NOG32695 non supervised orthologous group; Psort location: Cytoplasmic, score:8.87. (94 aa)    
Predicted Functional Partners:
EDP25414.1
KEGG: shn:Shewana3_3435 9.9e-22 transcriptional regulator, LysR family K06022; COG: COG0583 Transcriptional regulator; Psort location: Cytoplasmic, score:9.98; Belongs to the LysR transcriptional regulatory family.
       0.773
EDP25411.1
Hypothetical protein.
       0.563
EDP25412.1
KEGG: efa:EF1922 0.00024 transcriptional regulator, LacI family/carbohydrate kinase, PfkB family protein K00852; COG: COG1609 Transcriptional regulators.
       0.563
EDP25409.1
DNA-binding helix-turn-helix protein; COG: NOG36365 non supervised orthologous group; Psort location: Cytoplasmic, score:8.87.
       0.473
EDP25410.1
HipA domain protein; COG: COG3550 Uncharacterized protein related to capsule biosynthesis enzymes; Psort location: Cytoplasmic, score:8.87.
       0.473
EDP25415.1
COG: COG2364 Predicted membrane protein; Psort location: CytoplasmicMembrane, score:9.99.
       0.441
EDP24936.1
SPFH/Band 7/PHB domain protein; KEGG: reh:H16_A2036 1.3e-53 membrane protease subunits, stomatin/prohibitin homologs K01423; COG: COG0330 Membrane protease subunits, stomatin/prohibitin homologs.
  
    0.428
Your Current Organism:
Coprococcus eutactus
NCBI taxonomy Id: 411474
Other names: C. eutactus ATCC 27759, Coprococcus eutactus ATCC 27759
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