close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP25414.1KEGG: shn:Shewana3_3435 9.9e-22 transcriptional regulator, LysR family K06022; COG: COG0583 Transcriptional regulator; Psort location: Cytoplasmic, score:9.98; Belongs to the LysR transcriptional regulatory family. (292 aa)    
Predicted Functional Partners:
EDP25413.1
Hypothetical protein; COG: NOG32695 non supervised orthologous group; Psort location: Cytoplasmic, score:8.87.
       0.773
EDP25502.1
Cupin domain protein; KEGG: lpl:lp_2852 9.6e-24 4-carboxymuconolactone decarboxylase (putative) K01607; COG: COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain; Psort location: Cytoplasmic, score:8.87.
 
     0.567
EDP25411.1
Hypothetical protein.
       0.563
EDP25412.1
KEGG: efa:EF1922 0.00024 transcriptional regulator, LacI family/carbohydrate kinase, PfkB family protein K00852; COG: COG1609 Transcriptional regulators.
       0.563
EDP25409.1
DNA-binding helix-turn-helix protein; COG: NOG36365 non supervised orthologous group; Psort location: Cytoplasmic, score:8.87.
  
    0.479
EDP25410.1
HipA domain protein; COG: COG3550 Uncharacterized protein related to capsule biosynthesis enzymes; Psort location: Cytoplasmic, score:8.87.
       0.473
EDP25415.1
COG: COG2364 Predicted membrane protein; Psort location: CytoplasmicMembrane, score:9.99.
       0.441
EDP25501.1
Flavodoxin-like protein; KEGG: sbo:SBO_2185 0.00091 ycaK; hypothetical protein; COG: COG0716 Flavodoxins.
  
    0.428
Your Current Organism:
Coprococcus eutactus
NCBI taxonomy Id: 411474
Other names: C. eutactus ATCC 27759, Coprococcus eutactus ATCC 27759
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.