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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP25420.1Hypothetical protein. (54 aa)    
Predicted Functional Partners:
EDP25419.1
Thioredoxin; KEGG: lwe:lwe1188 3.1e-11 trxA; thioredoxin K00384; COG: COG0526 Thiol-disulfide isomerase and thioredoxins; Psort location: Cytoplasmic, score:8.87.
       0.773
EDP25421.1
Hypothetical protein; Psort location: Cytoplasmic, score:8.87.
       0.542
EDP25422.1
Rubredoxin; KEGG: cpr:CPR_0938 2.9e-63 periplasmic [Fe] hydrogenase 1 K00532; COG: COG1592 Rubrerythrin.
       0.542
ldh
L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family.
       0.438
EDP25424.1
Putative superoxide reductase; KEGG: dvu:DVU3183 5.7e-26 rbo; desulfoferrodoxin K05919; COG: COG2033 Desulfoferrodoxin; Psort location: Cytoplasmic, score:8.87.
       0.433
Your Current Organism:
Coprococcus eutactus
NCBI taxonomy Id: 411474
Other names: C. eutactus ATCC 27759, Coprococcus eutactus ATCC 27759
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