Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDP25422.1Rubredoxin; KEGG: cpr:CPR_0938 2.9e-63 periplasmic [Fe] hydrogenase 1 K00532; COG: COG1592 Rubrerythrin. (211 aa)    
Predicted Functional Partners:
EDP26752.1
Rubredoxin; KEGG: sat:SYN_02123 3.1e-27 ferric-chelate reductase / rubredoxin K00521; COG: COG1773 Rubredoxin; Psort location: Cytoplasmic, score:8.87.
 
  
 0.883
EDP25424.1
Putative superoxide reductase; KEGG: dvu:DVU3183 5.7e-26 rbo; desulfoferrodoxin K05919; COG: COG2033 Desulfoferrodoxin; Psort location: Cytoplasmic, score:8.87.
 
  
 0.858
EDP25421.1
Hypothetical protein; Psort location: Cytoplasmic, score:8.87.
  
  
 0.840
ldh
L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family.
   
   0.640
EDP25419.1
Thioredoxin; KEGG: lwe:lwe1188 3.1e-11 trxA; thioredoxin K00384; COG: COG0526 Thiol-disulfide isomerase and thioredoxins; Psort location: Cytoplasmic, score:8.87.
     
 0.547
EDP25420.1
Hypothetical protein.
       0.542
EDP25425.1
Hypothetical protein; Psort location: Extracellular, score:8.82.
       0.504
EDP25426.1
Hypothetical protein.
       0.421
EDP25427.1
Hypothetical protein; Psort location: Cytoplasmic, score:8.87.
       0.421
EDP25428.1
Hypothetical protein.
       0.421
Your Current Organism:
Coprococcus eutactus
NCBI taxonomy Id: 411474
Other names: C. eutactus ATCC 27759, Coprococcus eutactus ATCC 27759
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