Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDP25425.1Hypothetical protein; Psort location: Extracellular, score:8.82. (35 aa)    
Predicted Functional Partners:
EDP25424.1
Putative superoxide reductase; KEGG: dvu:DVU3183 5.7e-26 rbo; desulfoferrodoxin K05919; COG: COG2033 Desulfoferrodoxin; Psort location: Cytoplasmic, score:8.87.
       0.639
EDP25426.1
Hypothetical protein.
       0.631
EDP25427.1
Hypothetical protein; Psort location: Cytoplasmic, score:8.87.
       0.631
EDP25428.1
Hypothetical protein.
       0.631
ldh
L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family.
       0.630
EDP25429.1
CobQ/CobB/MinD/ParA nucleotide binding domain protein; KEGG: cch:Cag_1803 4.3e-44 ATPase, ParA family K03496; COG: COG1192 ATPases involved in chromosome partitioning.
       0.585
EDP25430.1
ParB-like protein; KEGG: pub:SAR11_0354 1.3e-07 parB; chromosome partitioning protein K03497; COG: COG1475 Predicted transcriptional regulators; Psort location: Cytoplasmic, score:8.87; Belongs to the ParB family.
       0.585
EDP25431.1
Hypothetical protein; COG: NOG20193 non supervised orthologous group; Psort location: Cytoplasmic, score:8.87.
       0.585
EDP25432.1
Hypothetical protein.
       0.523
EDP25421.1
Hypothetical protein; Psort location: Cytoplasmic, score:8.87.
       0.504
Your Current Organism:
Coprococcus eutactus
NCBI taxonomy Id: 411474
Other names: C. eutactus ATCC 27759, Coprococcus eutactus ATCC 27759
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