Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDP25436.1Hypothetical protein; COG: COG3505 Type IV secretory pathway, VirD4 components. (392 aa)    
Predicted Functional Partners:
EDP25492.1
Hypothetical protein; COG: COG3505 Type IV secretory pathway, VirD4 components; Psort location: Cytoplasmic, score:8.87.
 
     0.975
EDP26498.1
Hypothetical protein; COG: COG3505 Type IV secretory pathway, VirD4 components.
 
     0.915
EDP25431.1
Hypothetical protein; COG: NOG20193 non supervised orthologous group; Psort location: Cytoplasmic, score:8.87.
 
     0.823
EDP25458.1
Hypothetical protein; COG: COG3451 Type IV secretory pathway, VirB4 components; Psort location: Cytoplasmic, score:8.87.
 
  
 0.789
EDP25460.1
Hypothetical protein; COG: NOG28113 non supervised orthologous group; Psort location: CytoplasmicMembrane, score:9.75.
 
     0.777
EDP25434.1
Hypothetical protein.
       0.773
EDP25435.1
Hypothetical protein; KEGG: bta:512236 0.0018 MGC139658; similar to serine/threonine-protein kinase PRP4K K08827; COG: KOG0946 ER-Golgi vesicle-tethering protein p115.
       0.773
EDP25476.1
Hypothetical protein.
 
     0.772
EDP25261.1
Putative phage head-tail adaptor; KEGG: ehi:192.t00009 0.0015 recQ family helicase, putative K03654; COG: COG3505 Type IV secretory pathway, VirD4 components; Psort location: Cytoplasmic, score:8.87.
  
     0.765
EDP24906.1
Helicase C-terminal domain protein; KEGG: ehi:3.t00009 2.2e-07 ATP-dependent chromatin remodeling protein SNF2H, putative K01509; COG: COG0827 Adenine-specific DNA methylase; Psort location: Cytoplasmic, score:8.87.
 
     0.762
Your Current Organism:
Coprococcus eutactus
NCBI taxonomy Id: 411474
Other names: C. eutactus ATCC 27759, Coprococcus eutactus ATCC 27759
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