Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDP25448.1Hypothetical protein; Psort location: Extracellular, score:8.82. (63 aa)    
Predicted Functional Partners:
EDP25451.1
Hypothetical protein; COG: NOG17367 non supervised orthologous group; Psort location: Cytoplasmic, score:8.87.
 
     0.871
EDP25449.1
Hypothetical protein.
 
     0.868
EDP25450.1
Hypothetical protein; Psort location: Cytoplasmic, score:8.87.
 
     0.860
EDP25455.1
Hypothetical protein; Psort location: Cytoplasmic, score:8.87.
 
     0.830
EDP25454.1
Hypothetical protein; COG: NOG36404 non supervised orthologous group.
 
     0.816
EDP25456.1
Hypothetical protein; KEGG: nme:NMB0700 8.8e-10 IgA-specific serine endopeptidase K01347; COG: COG0791 Cell wall-associated hydrolases (invasion-associated proteins).
 
     0.799
EDP25440.1
Hypothetical protein; COG: NOG21981 non supervised orthologous group.
  
     0.749
EDP25446.1
Relaxase/mobilization nuclease domain protein; COG: COG3843 Type IV secretory pathway, VirD2 components (relaxase).
 
     0.705
EDP25483.1
Hypothetical protein; KEGG: hpa:HPAG1_1000 0.0049 autophosphorylating histidine kinase; COG: NOG34358 non supervised orthologous group; Psort location: Cytoplasmic, score:8.87.
  
     0.702
EDP25459.1
Hypothetical protein; COG: NOG33085 non supervised orthologous group; Psort location: CytoplasmicMembrane, score:9.75.
 
     0.693
Your Current Organism:
Coprococcus eutactus
NCBI taxonomy Id: 411474
Other names: C. eutactus ATCC 27759, Coprococcus eutactus ATCC 27759
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