Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDP25452.1DNA topoisomerase; KEGG: efa:EF2312 4.7e-189 topB-2; DNA topoisomerase III K03169; COG: COG0550 Topoisomerase IA; Psort location: Cytoplasmic, score:8.87. (696 aa)    
Predicted Functional Partners:
EDP27167.1
KEGG: bld:BLi02214 5.1e-120 yocI; similar to ATP-dependent DNA helicase; RBL02144 K03654; COG: COG0514 Superfamily II DNA helicase; Psort location: Cytoplasmic, score:8.87.
 
 
 0.918
EDP25454.1
Hypothetical protein; COG: NOG36404 non supervised orthologous group.
 
     0.914
EDP25455.1
Hypothetical protein; Psort location: Cytoplasmic, score:8.87.
 
     0.876
EDP25456.1
Hypothetical protein; KEGG: nme:NMB0700 8.8e-10 IgA-specific serine endopeptidase K01347; COG: COG0791 Cell wall-associated hydrolases (invasion-associated proteins).
 
     0.828
EDP25459.1
Hypothetical protein; COG: NOG33085 non supervised orthologous group; Psort location: CytoplasmicMembrane, score:9.75.
 
    0.826
EDP25458.1
Hypothetical protein; COG: COG3451 Type IV secretory pathway, VirB4 components; Psort location: Cytoplasmic, score:8.87.
 
  
 0.824
EDP25460.1
Hypothetical protein; COG: NOG28113 non supervised orthologous group; Psort location: CytoplasmicMembrane, score:9.75.
 
     0.767
EDP25451.1
Hypothetical protein; COG: NOG17367 non supervised orthologous group; Psort location: Cytoplasmic, score:8.87.
 
     0.759
EDP25453.1
Hypothetical protein.
       0.741
EDP27153.1
KEGG: ctc:CTC00579 1.1e-95 sbcC; exonuclease sbcC K03546; COG: COG0419 ATPase involved in DNA repair; Psort location: Cytoplasmic, score:8.87.
  
 0.665
Your Current Organism:
Coprococcus eutactus
NCBI taxonomy Id: 411474
Other names: C. eutactus ATCC 27759, Coprococcus eutactus ATCC 27759
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