STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP25465.1Hypothetical protein; KEGG ppr:PBPRA1165 0.0097 serS; putative seryl-tRNA synthetase K01875. (86 aa)    
Predicted Functional Partners:
repA
Replication initiator protein A domain protein; COG: NOG34358 non supervised orthologous group; Psort location: CytoplasmicMembrane, score:9.75.
       0.568
EDP25462.1
Hypothetical protein.
       0.562
EDP25463.1
Hypothetical protein; KEGG: spi:MGAS10750_Spy1680 1.6e-37 replicative DNA helicase K01529; COG: COG1484 DNA replication protein; Psort location: Cytoplasmic, score:8.87.
       0.562
Your Current Organism:
Coprococcus eutactus
NCBI taxonomy Id: 411474
Other names: C. eutactus ATCC 27759, Coprococcus eutactus ATCC 27759
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