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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP25476.1Hypothetical protein. (46 aa)    
Predicted Functional Partners:
EDP25460.1
Hypothetical protein; COG: NOG28113 non supervised orthologous group; Psort location: CytoplasmicMembrane, score:9.75.
 
     0.808
EDP25458.1
Hypothetical protein; COG: COG3451 Type IV secretory pathway, VirB4 components; Psort location: Cytoplasmic, score:8.87.
 
     0.802
EDP25478.1
TraG family protein; COG: COG3505 Type IV secretory pathway, VirD4 components; Psort location: Cytoplasmic, score:8.87.
 
     0.775
EDP25480.1
Hypothetical protein; COG: COG3505 Type IV secretory pathway, VirD4 components.
 
     0.775
EDP25436.1
Hypothetical protein; COG: COG3505 Type IV secretory pathway, VirD4 components.
 
     0.774
EDP25492.1
Hypothetical protein; COG: COG3505 Type IV secretory pathway, VirD4 components; Psort location: Cytoplasmic, score:8.87.
 
     0.773
EDP25459.1
Hypothetical protein; COG: NOG33085 non supervised orthologous group; Psort location: CytoplasmicMembrane, score:9.75.
 
     0.770
EDP25481.1
Hypothetical protein; KEGG: lac:LBA1588 0.00036 prtM; PrtM precursor K07533; Psort location: Cytoplasmic, score:8.87.
 
     0.755
EDP24906.1
Helicase C-terminal domain protein; KEGG: ehi:3.t00009 2.2e-07 ATP-dependent chromatin remodeling protein SNF2H, putative K01509; COG: COG0827 Adenine-specific DNA methylase; Psort location: Cytoplasmic, score:8.87.
 
   
 0.737
EDP26498.1
Hypothetical protein; COG: COG3505 Type IV secretory pathway, VirD4 components.
 
     0.718
Your Current Organism:
Coprococcus eutactus
NCBI taxonomy Id: 411474
Other names: C. eutactus ATCC 27759, Coprococcus eutactus ATCC 27759
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