Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDP25478.1TraG family protein; COG: COG3505 Type IV secretory pathway, VirD4 components; Psort location: Cytoplasmic, score:8.87. (325 aa)    
Predicted Functional Partners:
EDP25480.1
Hypothetical protein; COG: COG3505 Type IV secretory pathway, VirD4 components.
 
     0.976
EDP25458.1
Hypothetical protein; COG: COG3451 Type IV secretory pathway, VirB4 components; Psort location: Cytoplasmic, score:8.87.
 
  
 0.789
EDP25460.1
Hypothetical protein; COG: NOG28113 non supervised orthologous group; Psort location: CytoplasmicMembrane, score:9.75.
 
     0.777
EDP25476.1
Hypothetical protein.
 
     0.773
EDP25477.1
Hypothetical protein.
       0.773
EDP24906.1
Helicase C-terminal domain protein; KEGG: ehi:3.t00009 2.2e-07 ATP-dependent chromatin remodeling protein SNF2H, putative K01509; COG: COG0827 Adenine-specific DNA methylase; Psort location: Cytoplasmic, score:8.87.
 
     0.765
EDP25481.1
Hypothetical protein; KEGG: lac:LBA1588 0.00036 prtM; PrtM precursor K07533; Psort location: Cytoplasmic, score:8.87.
 
     0.745
EDP25446.1
Relaxase/mobilization nuclease domain protein; COG: COG3843 Type IV secretory pathway, VirD2 components (relaxase).
 
     0.672
EDP25459.1
Hypothetical protein; COG: NOG33085 non supervised orthologous group; Psort location: CytoplasmicMembrane, score:9.75.
 
     0.671
EDP25431.1
Hypothetical protein; COG: NOG20193 non supervised orthologous group; Psort location: Cytoplasmic, score:8.87.
  
     0.629
Your Current Organism:
Coprococcus eutactus
NCBI taxonomy Id: 411474
Other names: C. eutactus ATCC 27759, Coprococcus eutactus ATCC 27759
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