Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDP25500.1Transcriptional regulator, TetR family; KEGG: bcl:ABC2937 0.0035 NADH dehydrogenase K03885; COG: NOG38946 non supervised orthologous group; Psort location: Cytoplasmic, score:8.87. (221 aa)    
Predicted Functional Partners:
EDP25499.1
Hypothetical protein; KEGG: fnu:FN0984 1.1e-20 tetracenomycin polyketide synthesis O-methyltransferase TcmP K00599; COG: COG3315 O-Methyltransferase involved in polyketide biosynthesis; Psort location: Cytoplasmic, score:8.87.
 
     0.723
EDP27150.1
Transcriptional regulator, TetR family; KEGG: sai:Saci_1942 0.0013 proline iminopeptidase K01259; COG: COG1309 Transcriptional regulator; Psort location: Cytoplasmic, score:8.87.
  
     0.677
EDP25498.1
Hypothetical protein; COG: NOG21943 non supervised orthologous group; Psort location: Cytoplasmic, score:8.87.
       0.477
EDP25501.1
Flavodoxin-like protein; KEGG: sbo:SBO_2185 0.00091 ycaK; hypothetical protein; COG: COG0716 Flavodoxins.
 
     0.429
Your Current Organism:
Coprococcus eutactus
NCBI taxonomy Id: 411474
Other names: C. eutactus ATCC 27759, Coprococcus eutactus ATCC 27759
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