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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP25501.1Flavodoxin-like protein; KEGG: sbo:SBO_2185 0.00091 ycaK; hypothetical protein; COG: COG0716 Flavodoxins. (158 aa)    
Predicted Functional Partners:
EDP25502.1
Cupin domain protein; KEGG: lpl:lp_2852 9.6e-24 4-carboxymuconolactone decarboxylase (putative) K01607; COG: COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain; Psort location: Cytoplasmic, score:8.87.
 
     0.905
ribA
GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
    
  0.737
EDP25499.1
Hypothetical protein; KEGG: fnu:FN0984 1.1e-20 tetracenomycin polyketide synthesis O-methyltransferase TcmP K00599; COG: COG3315 O-Methyltransferase involved in polyketide biosynthesis; Psort location: Cytoplasmic, score:8.87.
 
     0.437
EDP25500.1
Transcriptional regulator, TetR family; KEGG: bcl:ABC2937 0.0035 NADH dehydrogenase K03885; COG: NOG38946 non supervised orthologous group; Psort location: Cytoplasmic, score:8.87.
 
     0.429
EDP25414.1
KEGG: shn:Shewana3_3435 9.9e-22 transcriptional regulator, LysR family K06022; COG: COG0583 Transcriptional regulator; Psort location: Cytoplasmic, score:9.98; Belongs to the LysR transcriptional regulatory family.
  
    0.428
Your Current Organism:
Coprococcus eutactus
NCBI taxonomy Id: 411474
Other names: C. eutactus ATCC 27759, Coprococcus eutactus ATCC 27759
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