Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDP25351.1Hypothetical protein; Psort location: Cytoplasmic, score:8.87. (76 aa)    
Predicted Functional Partners:
EDP25350.1
Amidohydrolase family protein; KEGG: ctc:CTC00933 6.0e-31 parathion hydrolase K01140; COG: COG1228 Imidazolonepropionase and related amidohydrolases; Psort location: Cytoplasmic, score:8.87.
       0.645
EDP25349.1
Hypothetical protein; Psort location: Cytoplasmic, score:10.00.
       0.445
Your Current Organism:
Coprococcus eutactus
NCBI taxonomy Id: 411474
Other names: C. eutactus ATCC 27759, Coprococcus eutactus ATCC 27759
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