Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EDP25372.1Hypothetical protein; Psort location: Cytoplasmic, score:8.87. (110 aa)    
Predicted Functional Partners:
EDP25370.1
Hypothetical protein; KEGG: cdi:DIP1443 0.0010 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791; Psort location: Cytoplasmic, score:8.87.
       0.468
mprF-2
Hypothetical protein; Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms.
       0.468
EDP25373.1
Hypothetical protein; KEGG: bsu:BG13136 0.0044 yjbG; oligoendopeptidase F homolog K08602; COG: COG1512 Beta-propeller domains of methanol dehydrogenase type; Psort location: CytoplasmicMembrane, score:9.26.
       0.455
EDP25374.1
YgiT-type zinc finger domain protein; COG: NOG06495 non supervised orthologous group; Psort location: CytoplasmicMembrane, score:9.99.
       0.436
Your Current Organism:
Coprococcus eutactus
NCBI taxonomy Id: 411474
Other names: C. eutactus ATCC 27759, Coprococcus eutactus ATCC 27759
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