Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDP25388.1Hypothetical protein; KEGG: efa:EF1500 0.0084 V-type ATPase, subunit D K02120; Psort location: Cytoplasmic, score:8.87. (99 aa)    
Predicted Functional Partners:
EDP25389.1
Putative plasmid recombination enzyme; Psort location: Cytoplasmic, score:8.87.
       0.773
EDP25385.1
Hypothetical protein; Psort location: Cytoplasmic, score:8.87.
       0.542
EDP25386.1
Hypothetical protein; KEGG: cno:NT01CX_1803 8.2e-28 type IIS restriction enzyme R and M protein, putative K00571; COG: COG1002 Type II restriction enzyme, methylase subunits; Psort location: CytoplasmicMembrane, score:9.75.
       0.542
EDP25387.1
Hypothetical protein; COG: COG3655 Predicted transcriptional regulator; Psort location: Cytoplasmic, score:8.87.
       0.542
EDP25383.1
ATPase family associated with various cellular activities (AAA); KEGG: cno:NT01CX_0457 3.1e-57 ATP-dependent Clp protease, ATPase subunit, putative K01423; COG: COG0542 ATPases with chaperone activity, ATP-binding subunit; Psort location: Cytoplasmic, score:9.98.
       0.426
EDP25384.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score:9.99.
       0.426
EDP25391.1
Hypothetical protein; Psort location: Cytoplasmic, score:8.87.
       0.404
Your Current Organism:
Coprococcus eutactus
NCBI taxonomy Id: 411474
Other names: C. eutactus ATCC 27759, Coprococcus eutactus ATCC 27759
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