Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EDP24866.1LytTr DNA-binding domain protein; KEGG: rru:Rru_A0376 4.1e-07 transcriptional regulator, LytR/AlgR family K07705; COG: COG3279 Response regulator of the LytR/AlgR family; Psort location: Cytoplasmic, score:8.87. (241 aa)    
Predicted Functional Partners:
EDP24867.1
Hypothetical protein; KEGG: sam:MW1962 7.4e-10 agrC; AgrC K07706; COG: COG2972 Predicted signal transduction protein with a C-terminal ATPase domain; Psort location: CytoplasmicMembrane, score:9.97.
 
   
 0.879
EDP24868.1
Hypothetical protein.
       0.773
EDP24869.1
Hypothetical protein; Psort location: Cytoplasmic, score:8.87.
       0.773
EDP27016.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: tte:TTE2344 1.1e-52 lytS2; predicted ATPase K07718; COG: COG2972 Predicted signal transduction protein with a C-terminal ATPase domain.
 
  
 0.652
EDP24870.1
Hypothetical protein.
       0.588
EDP24871.1
COG: COG4185 Uncharacterized protein conserved in bacteria; Psort location: Cytoplasmic, score:8.87.
       0.588
EDP24865.1
Hypothetical protein.
       0.426
EDP26723.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: bha:BH3447 6.6e-64 two-component sensor histidine kinase K07718; COG: COG2972 Predicted signal transduction protein with a C-terminal ATPase domain.
 
  
 0.419
EDP26167.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: tte:TTE0562 8.0e-17 baeS2; sensory transduction histidine kinases K07706; COG: COG2972 Predicted signal transduction protein with a C-terminal ATPase domain; Psort location: CytoplasmicMembrane, score:9.99.
 
   
 0.417
EDP24930.1
Response regulator receiver domain protein; KEGG: ana:alr4879 6.5e-07 two-component hybrid sensor and regulator; COG: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain.
  
     0.404
Your Current Organism:
Coprococcus eutactus
NCBI taxonomy Id: 411474
Other names: C. eutactus ATCC 27759, Coprococcus eutactus ATCC 27759
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