Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDP24871.1COG: COG4185 Uncharacterized protein conserved in bacteria; Psort location: Cytoplasmic, score:8.87. (184 aa)    
Predicted Functional Partners:
EDP24870.1
Hypothetical protein.
       0.787
EDP27730.1
DNA-binding helix-turn-helix protein; COG: NOG16841 non supervised orthologous group; Psort location: Cytoplasmic, score:8.87.
   
 
 0.673
EDP26533.1
DNA-binding helix-turn-helix protein; COG: COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidases).
   
 
 0.673
EDP25641.1
DNA-binding helix-turn-helix protein; COG: COG1396 Predicted transcriptional regulators.
   
 
 0.673
EDP25395.1
DNA-binding helix-turn-helix protein; Psort location: Cytoplasmic, score:8.87.
   
 
 0.673
EDP24866.1
LytTr DNA-binding domain protein; KEGG: rru:Rru_A0376 4.1e-07 transcriptional regulator, LytR/AlgR family K07705; COG: COG3279 Response regulator of the LytR/AlgR family; Psort location: Cytoplasmic, score:8.87.
       0.588
EDP24867.1
Hypothetical protein; KEGG: sam:MW1962 7.4e-10 agrC; AgrC K07706; COG: COG2972 Predicted signal transduction protein with a C-terminal ATPase domain; Psort location: CytoplasmicMembrane, score:9.97.
       0.588
EDP24868.1
Hypothetical protein.
       0.588
EDP24869.1
Hypothetical protein; Psort location: Cytoplasmic, score:8.87.
       0.588
EDP25373.1
Hypothetical protein; KEGG: bsu:BG13136 0.0044 yjbG; oligoendopeptidase F homolog K08602; COG: COG1512 Beta-propeller domains of methanol dehydrogenase type; Psort location: CytoplasmicMembrane, score:9.26.
  
     0.454
Your Current Organism:
Coprococcus eutactus
NCBI taxonomy Id: 411474
Other names: C. eutactus ATCC 27759, Coprococcus eutactus ATCC 27759
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