STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP24883.1Hypothetical protein; COG: COG0842 ABC-type multidrug transport system, permease component; Psort location: CytoplasmicMembrane, score:9.99. (378 aa)    
Predicted Functional Partners:
EDP24884.1
ABC-2 type transporter; COG: COG0842 ABC-type multidrug transport system, permease component; Psort location: CytoplasmicMembrane, score:7.63.
 
     0.958
EDP24882.1
KEGG: rha:RHA1_ro04791 1.7e-42 ABC transporter, ATP-binding component K01990; COG: COG1131 ABC-type multidrug transport system, ATPase component; Psort location: CytoplasmicMembrane, score:9.49.
 
 
  0.923
EDP24880.1
Histidine kinase; KEGG: pha:PSHAa1592 4.0e-17 uhpB; sensory histidine kinase in two-component regulatory system with UhpA, regulates UhpT expression K07675; COG: COG4585 Signal transduction histidine kinase; Psort location: CytoplasmicMembrane, score:10.00.
 
    0.848
EDP24879.1
Response regulator receiver domain protein; KEGG: ava:Ava_2028 3.0e-36 two component transcriptional regulator, LuxR family; COG: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; Psort location: Cytoplasmic, score:9.98.
 
   
 0.807
EDP26072.1
Hypothetical protein; COG: NOG09742 non supervised orthologous group; Psort location: CytoplasmicMembrane, score:9.99.
  
     0.498
EDP24885.1
Hypothetical protein; Psort location: Cytoplasmic, score:8.87.
       0.491
EDP24886.1
Hypothetical protein.
       0.491
EDP24881.1
Hypothetical protein.
       0.470
EDP24887.1
Alpha amylase, catalytic domain protein; KEGG: pha:PSHAa1357 1.6e-67 alpha-amylase K01187; COG: COG0366 Glycosidases; Psort location: Cytoplasmic, score:9.65.
       0.436
EDP27039.1
Hypothetical protein; COG: NOG32680 non supervised orthologous group; Psort location: Cytoplasmic, score:8.87.
  
    0.412
Your Current Organism:
Coprococcus eutactus
NCBI taxonomy Id: 411474
Other names: C. eutactus ATCC 27759, Coprococcus eutactus ATCC 27759
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.