STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP25005.1Hypothetical protein; Psort location: Cytoplasmic, score:8.87. (90 aa)    
Predicted Functional Partners:
rnj
Hypothetical protein; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay.
       0.823
EDP25007.1
Hypothetical protein; KEGG: ago:ABL041W 0.0063 ABL041Wp; mitochondrial ATPase K08956; COG: NOG16880 non supervised orthologous group; Psort location: Cytoplasmic, score:8.87; Belongs to the UPF0342 family.
       0.781
EDP26817.1
Hypothetical protein; Psort location: Cytoplasmic, score:8.87.
  
     0.768
EDP26076.1
Hypothetical protein.
  
     0.759
EDP27416.1
Hypothetical protein; Psort location: Cytoplasmic, score:8.87.
  
     0.756
EDP26831.1
Hypothetical protein; COG: NOG14302 non supervised orthologous group; Psort location: CytoplasmicMembrane, score:9.99.
  
     0.756
EDP27815.1
Tetratricopeptide repeat protein; Psort location: Cytoplasmic, score:8.87.
  
     0.755
EDP25134.1
Hypothetical protein.
  
     0.754
EDP26765.1
Hypothetical protein; Psort location: Cytoplasmic, score:8.87.
  
     0.750
EDP25004.1
RNAse H domain protein, YqgF family; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family.
       0.750
Your Current Organism:
Coprococcus eutactus
NCBI taxonomy Id: 411474
Other names: C. eutactus ATCC 27759, Coprococcus eutactus ATCC 27759
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.