STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP25019.1Hypothetical protein. (250 aa)    
Predicted Functional Partners:
EDP25018.1
COG: COG4972 Tfp pilus assembly protein, ATPase PilM; Psort location: Cytoplasmic, score:8.87.
  
 
 0.967
EDP25015.1
Bacterial type II secretion system domain protein F; COG: COG1459 Type II secretory pathway, component PulF; Psort location: CytoplasmicMembrane, score:9.99.
   
 
 0.886
EDP25013.1
KEGG: pen:PSEEN2333 1.3e-88 xcpR-2; type II secretion pathway protein E K01509; COG: COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB; Psort location: Cytoplasmic, score:9.98.
  
 
 0.879
EDP25020.1
Prepilin-type cleavage/methylation N-terminal domain protein.
       0.708
EDP25021.1
Hypothetical protein; KEGG: pfa:PF11_0395 0.00079 guanylyl cyclase K01769; COG: COG5295 Autotransporter adhesin.
       0.676
EDP25024.1
Hypothetical protein; Psort location: Extracellular, score:9.04.
       0.661
EDP25022.1
Prepilin-type cleavage/methylation N-terminal domain protein.
       0.633
EDP25023.1
Prepilin-type cleavage/methylation N-terminal domain protein.
       0.604
EDP25016.1
Prepilin-type cleavage/methylation N-terminal domain protein; COG: NOG21745 non supervised orthologous group.
  
  
 0.487
EDP25014.1
Twitching motility protein; KEGG: pen:PSEEN2333 2.5e-29 xcpR-2; type II secretion pathway protein E K01509; COG: COG2805 Tfp pilus assembly protein, pilus retraction ATPase PilT; Psort location: Cytoplasmic, score:9.98.
  
  
 0.484
Your Current Organism:
Coprococcus eutactus
NCBI taxonomy Id: 411474
Other names: C. eutactus ATCC 27759, Coprococcus eutactus ATCC 27759
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