STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEU98105.1Transketolase, pyridine binding domain protein; KEGG: cpf:CPF_0293 5.3e-94 putative transketolase, C-terminal subunit K00615; Psort location: Cytoplasmic, score: 8.96. (314 aa)    
Predicted Functional Partners:
EEU98106.1
Transketolase, thiamine diphosphate binding domain protein; KEGG: cpr:CPR_0287 4.2e-78 transketolase K00615; Psort location: Cytoplasmic, score: 8.96.
 0.999
rpe
Ribulose-phosphate 3-epimerase; KEGG: mmu:66646 1.2e-50 Rpe; ribulose-5-phosphate-3-epimerase K01783; Psort location: Cytoplasmic, score: 8.96; Belongs to the ribulose-phosphate 3-epimerase family.
 
 
 0.938
rpiB
KEGG: cpr:CPR_2173 3.5e-42 ribose 5-phosphate isomerase B K01808; Psort location: Cytoplasmic, score: 8.96.
 
 
 0.888
nifJ
KEGG: cpr:CPR_2032 0. pyruvate-flavodoxin oxidoreductase K03737.
   
 
 0.872
gap
KEGG: fth:FTH_1121 2.9e-118 gapA; glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) K00134; Psort location: Cytoplasmic, score: 9.97.
    
 0.865
pyk
Pyruvate kinase; KEGG: tte:TTE1815 1.4e-159 pykF; pyruvate kinase K00873; Belongs to the pyruvate kinase family.
   
 
  0.859
pgi
KEGG: cpf:CPF_2549 3.8e-139 pgi; glucose-6-phosphate isomerase K01810; Psort location: Cytoplasmic, score: 9.26; Belongs to the GPI family.
     
 0.858
tpiA
Triose-phosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.
    
 0.856
prs
KEGG: cpr:CPR_1519 1.2e-94 prs; ribose-phosphate pyrophosphokinase K00948; Belongs to the ribose-phosphate pyrophosphokinase family.
    
  0.855
EEU98179.1
KEGG: cpf:CPF_1070 2.5e-135 PTS system, N-acetylglucosamine-specific IIBC component K02803:K02804; Psort location: CytoplasmicMembrane, score: 10.00.
    
  0.854
Your Current Organism:
Faecalibacterium prausnitzii A2165
NCBI taxonomy Id: 411483
Other names: F. prausnitzii A2-165, Faecalibacterium prausnitzii A2-165
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