STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEU98274.1CHC2 zinc finger domain protein; KEGG: dvu:DVU1789 1.2e-09 dnaG; DNA primase K02316; Psort location: Cytoplasmic, score: 8.96. (151 aa)    
Predicted Functional Partners:
EEU98275.1
Phage/plasmid primase, P4 family domain protein; KEGG: hwa:HQ4022A 6.8e-05 putative P4-specific DNA primase; Psort location: Cytoplasmic, score: 8.96.
 
  
 0.860
dnaB
Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.
  
 0.857
EEU97982.1
Hypothetical protein; KEGG: dde:Dde_2615 0.0020 glutamyl-tRNA(Gln) amidotransferase, B subunit K02434; Psort location: Cytoplasmic, score: 8.96.
 
      0.790
polA
KEGG: sth:STH848 2.4e-176 DNA polymerase I K02335.
  
 
 0.729
EEU95774.1
Hypothetical protein; KEGG: vfi:VFB02 0.0021 traC; DNA primase TraC.
 
      0.700
EEU97520.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.616
EEU98271.1
Bacterial mobilization protein MobC; Psort location: Cytoplasmic, score: 8.96.
 
     0.525
der
Ribosome biogenesis GTPase Der; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.
   
    0.525
nifJ
KEGG: cpr:CPR_2032 0. pyruvate-flavodoxin oxidoreductase K03737.
  
   0.518
EEU98272.1
Relaxase/mobilization nuclease domain protein; Psort location: Cytoplasmic, score: 8.96.
  
    0.456
Your Current Organism:
Faecalibacterium prausnitzii A2165
NCBI taxonomy Id: 411483
Other names: F. prausnitzii A2-165, Faecalibacterium prausnitzii A2-165
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.