STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEU98057.1TrkA N-terminal domain protein; Psort location: Cytoplasmic, score: 8.96. (221 aa)    
Predicted Functional Partners:
EEU97264.1
Cation transport protein; KEGG: shn:Shewana3_0031 1.8e-68 potassium uptake protein, TrkH family K00961; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.960
EEU96655.1
KEGG: ama:AM1116 7.8e-09 trkH; potassium uptake protein K03498; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.817
EEU95239.1
KEGG: ama:AM1116 6.7e-07 trkH; potassium uptake protein K03498; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.817
EEU98055.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.773
EEU98056.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.46.
       0.773
nadE
NAD+ synthase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
  
 
  0.762
EEU98059.1
TrkA N-terminal domain protein; Psort location: Cytoplasmic, score: 8.96.
 
    
0.721
cinA
Competence/damage-inducible domain protein CinA; KEGG: hsa:80308 2.3e-11 FLAD1; FAD1 flavin adenine dinucleotide synthetase homolog (S. cerevisiae) K00953; Psort location: Cytoplasmic, score: 8.96; Belongs to the CinA family.
    
 0.636
EEU96675.1
Hypothetical protein; Belongs to the CinA family.
    
 0.636
sun
Ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.
  
   0.575
Your Current Organism:
Faecalibacterium prausnitzii A2165
NCBI taxonomy Id: 411483
Other names: F. prausnitzii A2-165, Faecalibacterium prausnitzii A2-165
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.