STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cmkCytidylate kinase; KEGG: pca:Pcar_1884 9.4e-49 cytidylate kinase K00945; Psort location: Cytoplasmic, score: 8.96. (221 aa)    
Predicted Functional Partners:
der
Ribosome biogenesis GTPase Der; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.
  
 0.986
ispH
4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family.
 
 
 0.973
scpB
Segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves.
  
 0.972
aroA
3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.
 
 
 0.949
EEU98353.1
Chorismate mutase; KEGG: bxe:Bxe_A0977 1.7e-42 bifunctional, chorismate mutase/prephenate dehydratase K01850; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.942
EEU98031.1
Acyltransferase; KEGG: sth:STH1669 1.5e-18 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655; Psort location: Cytoplasmic, score: 8.96.
   
 0.942
EEU96852.1
Pseudouridylate synthase; KEGG: dsy:DSY2280 1.9e-50 hypothetical protein K06178; Psort location: Cytoplasmic, score: 8.96; Belongs to the pseudouridine synthase RsuA family.
  
 0.923
ribF
Riboflavin biosynthesis protein RibF; KEGG: bba:Bd1507 2.1e-42 ribC; riboflavin kinase / FAD synthase ribC K00861:K00953; Psort location: Cytoplasmic, score: 8.96; Belongs to the ribF family.
 
  
 0.873
EEU98346.1
KEGG: cno:NT01CX_0626 2.0e-48 prephenate dehydrogenase K00210; Psort location: Cytoplasmic, score: 8.96.
 
 
 0.866
EEU96559.1
Phosphoribulokinase/uridine kinase family protein; KEGG: cac:CAC0672 1.8e-36 fision threonyl-tRNA synthetase (N-terminal part) and uridine kinase K00876; Psort location: Cytoplasmic, score: 8.96.
   
 
 0.866
Your Current Organism:
Faecalibacterium prausnitzii A2165
NCBI taxonomy Id: 411483
Other names: F. prausnitzii A2-165, Faecalibacterium prausnitzii A2-165
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.