STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEU97709.1POTRA domain protein, FtsQ-type; Essential cell division protein. (404 aa)    
Predicted Functional Partners:
murG
Undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily.
 
  
 0.986
EEU97715.1
Penicillin-binding protein, transpeptidase domain protein; KEGG: swo:Swol_0820 1.7e-72 peptidoglycan glycosyltransferase K05364; Psort location: CytoplasmicMembrane, score: 8.02.
  
 
 0.973
secY
Preprotein translocase, SecY subunit; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.
 
 
 0.966
EEU97062.1
Hypothetical protein.
   
 
 0.964
EEU95214.1
Penicillin-binding protein, transpeptidase domain protein; KEGG: swo:Swol_0820 1.5e-80 peptidoglycan glycosyltransferase K05364.
  
 
 0.955
rpmD
Ribosomal protein L30.
  
 
 
 0.952
EEU96967.1
Penicillin-binding protein, transpeptidase domain protein; KEGG: ppd:Ppro_2545 1.8e-65 peptidoglycan glycosyltransferase K05364; Psort location: CytoplasmicMembrane, score: 8.02.
 
 
 0.949
EEU96522.1
KEGG: bcl:ABC0927 4.0e-15 cwlC; N-acetylmuramoyl-L-alanine amidase K01448; Psort location: OuterMembrane, score: 9.49.
 
 
 
 0.942
murD
UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.
 
  
 0.936
EEU97712.1
LPXTG-motif cell wall anchor domain protein; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the SEDS family.
  
 
 0.933
Your Current Organism:
Faecalibacterium prausnitzii A2165
NCBI taxonomy Id: 411483
Other names: F. prausnitzii A2-165, Faecalibacterium prausnitzii A2-165
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