STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tadACytidine and deoxycytidylate deaminase zinc-binding region; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family. (162 aa)    
Predicted Functional Partners:
hisE
phosphoribosyl-ATP diphosphatase; KEGG: tte:TTE2132 2.1e-58 hisI; phosphoribosyl-AMP cyclohydrolase K01496:K01523; Psort location: Cytoplasmic, score: 9.97; In the N-terminal section; belongs to the PRA-CH family.
   
  
 0.986
tilS-2
tRNA(Ile)-lysidine synthetase; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family.
 
 0.967
xth
Exodeoxyribonuclease III; KEGG: lsa:LSA1338 3.2e-87 exoA; exodeoxyribonuclease III K01142; Psort location: Cytoplasmic, score: 9.26.
   
 
 0.909
EEU98300.1
biotin--[acetyl-CoA-carboxylase] ligase; KEGG: lxx:Lxx04800 3.2e-32 birA; biotin acetyl-CoA-carboxylase synthetase K03524:K01947.
  
    0.908
birA
biotin--[acetyl-CoA-carboxylase] ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
  
    0.908
EEU96583.1
Alpha amylase, catalytic domain protein; KEGG: fal:FRAAL2309 7.0e-60 cyclomaltodextrinase K01208; Psort location: Cytoplasmic, score: 9.26.
      0.823
EEU97767.1
CAAX amino terminal protease family protein; KEGG: rsp:RSP_2266 0.0022 rluB; pseudouridine synthase, (predicted) K06178.
       0.773
guaA
GMP synthase (glutamine-hydrolyzing) domain protein; Catalyzes the synthesis of GMP from XMP.
     
 0.637
EEU97027.1
KEGG: msy:MS53_0047 2.0e-58 fusA; elongation factor EF-G K02355; Psort location: Cytoplasmic, score: 9.97.
    
  0.613
EEU97764.1
Oxidoreductase, short chain dehydrogenase/reductase family protein; KEGG: sth:STH968 1.2e-50 3-oxoacyl-(acyl-carrier protein) reductase K00059; Psort location: Cytoplasmic, score: 9.26.
 
  
 0.612
Your Current Organism:
Faecalibacterium prausnitzii A2165
NCBI taxonomy Id: 411483
Other names: F. prausnitzii A2-165, Faecalibacterium prausnitzii A2-165
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