STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEU96872.1ABC transporter, substrate-binding protein, family 5; KEGG: shn:Shewana3_2650 1.2e-05 acetate kinase K00925; Psort location: Periplasmic, score: 9.44. (543 aa)    
Predicted Functional Partners:
EEU97180.1
KEGG: rha:RHA1_ro09044 2.5e-62 ABC peptide transporter, ATP-binding protein K02032; Psort location: Cytoplasmic, score: 9.12.
 
 
 0.855
EEU97023.1
KEGG: cch:Cag_1705 1.6e-67 oligopeptide/dipeptide ABC transporter, ATP-binding protein-like K02032; Psort location: Cytoplasmic, score: 9.12.
 
 
 0.850
EEU97021.1
ABC transporter, permease protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.839
EEU97177.1
KEGG: rha:RHA1_ro09047 1.1e-24 ABC peptide transporter, permease component K02033; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.833
EEU97020.1
KEGG: rha:RHA1_ro09047 4.1e-23 ABC peptide transporter, permease component K02033; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.826
EEU97022.1
ABC transporter, ATP-binding protein; KEGG: mmo:MMOB4490 1.5e-73 pgk, oppD; bidomainal protein K00927; Psort location: CytoplasmicMembrane, score: 8.02; Belongs to the ABC transporter superfamily.
 
 
 0.821
EEU97178.1
ABC transporter, permease protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.818
nikA
Nickel ABC transporter, periplasmic nickel-binding protein; KEGG: shn:Shewana3_2650 1.4e-16 acetate kinase K00925; Psort location: Periplasmic, score: 9.44.
 
 
 0.811
EEU97202.1
KEGG: rha:RHA1_ro09047 7.5e-56 ABC peptide transporter, permease component K02033; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.802
EEU97179.1
ABC transporter, ATP-binding protein; KEGG: mmo:MMOB4490 1.1e-75 pgk, oppD; bidomainal protein K00927; Belongs to the ABC transporter superfamily.
 
 
 0.801
Your Current Organism:
Faecalibacterium prausnitzii A2165
NCBI taxonomy Id: 411483
Other names: F. prausnitzii A2-165, Faecalibacterium prausnitzii A2-165
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