STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pepTPeptidase T; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family. (405 aa)    
Predicted Functional Partners:
EEU98190.1
Peptidase, M24 family; KEGG: bfs:BF4027 1.6e-117 putative peptidase K01262.
  
 
 0.633
nifJ
KEGG: cpr:CPR_2032 0. pyruvate-flavodoxin oxidoreductase K03737.
     
 0.562
EEU96742.1
Putative inosine-5'-monophosphate dehydrogenase; KEGG: lmo:lmo0132 6.5e-208 similar to inosine monophosphate dehydrogenase K00088.
   
 
 0.561
ddl
D-ala D-ala ligase N-terminal domain protein; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.
  
 
 0.521
secF
Export membrane protein SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily.
     
 0.498
EEU95591.1
Dinuclear metal center protein, YbgI family.
  
    0.486
EEU98116.1
Dipeptidase PepV; KEGG: ctc:CTC01945 5.9e-95 succinyl-diaminopimelate desuccinylase K01270; Psort location: Cytoplasmic, score: 8.96.
    
 0.475
EEU98020.1
Putative dipeptidase; KEGG: cpe:CPE1211 9.4e-65 Xaa-His dipeptidase K01439.
    
 0.475
EEU97757.1
Aminotransferase, class I/II; KEGG: blo:BL0783 2.4e-137 probable aminotransferase K00811; Psort location: Cytoplasmic, score: 8.96.
   
  0.445
dapL
LL-diaminopimelate aminotransferase; Involved in the synthesis of meso-diaminopimelate (m-DAP or DL-DAP), required for both lysine and peptidoglycan biosynthesis. Catalyzes the direct conversion of tetrahydrodipicolinate to LL- diaminopimelate.
   
  0.445
Your Current Organism:
Faecalibacterium prausnitzii A2165
NCBI taxonomy Id: 411483
Other names: F. prausnitzii A2-165, Faecalibacterium prausnitzii A2-165
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.