STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEU96557.1Metallo-beta-lactamase domain protein; KEGG: sat:SYN_02709 1.6e-23 hydroxyacylglutathione hydrolase W K01069. (205 aa)    
Predicted Functional Partners:
EEU96555.1
RelA/SpoT family protein; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.
  
 
  0.789
hemZ
Coproporphyrinogen dehydrogenase HemZ; KEGG: bha:BH1152 7.0e-76 oxygen-independent coproporphyrinogen III oxidase, putative K02495; Psort location: Cytoplasmic, score: 9.97.
       0.775
EEU96559.1
Phosphoribulokinase/uridine kinase family protein; KEGG: cac:CAC0672 1.8e-36 fision threonyl-tRNA synthetase (N-terminal part) and uridine kinase K00876; Psort location: Cytoplasmic, score: 8.96.
       0.735
EEU95837.1
Rhodanese-like protein; KEGG: chu:CHU_2634 2.0e-14 naoX; NADH oxidase/rhodanese-related sulfurtransferase K00356; Psort location: Cytoplasmic, score: 8.96.
  
 0.709
recJ
KEGG: tte:TTE1191 4.0e-103 recJ; Single-stranded DNA-specific exonuclease K07462; Psort location: Cytoplasmic, score: 8.96.
  
    0.687
dtd
D-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family.
       0.687
EEU96553.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.605
pdxB-2
KEGG: son:SO3631 5.6e-67 hprA; glycerate dehydrogenase K00018; Psort location: Cytoplasmic, score: 9.26; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
 
 0.521
ybeY
Translation metalloprotein YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
   
 
 0.508
truA
tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
   
 
 0.506
Your Current Organism:
Faecalibacterium prausnitzii A2165
NCBI taxonomy Id: 411483
Other names: F. prausnitzii A2-165, Faecalibacterium prausnitzii A2-165
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