STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEU96352.1Transporter, CPA2 family; Psort location: CytoplasmicMembrane, score: 10.00. (398 aa)    
Predicted Functional Partners:
EEU96351.1
Ricin-type beta-trefoil lectin domain protein; KEGG: sde:Sde_3710 2.0e-09 arabinogalactan endo-1,4-beta-galactosidase K01224.
 
     0.485
EEU96612.1
Putative membrane protein; KEGG: pae:PA1977 0.0079 sensor protein GLPS; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.481
msrB
methionine-R-sulfoxide reductase; KEGG: bfs:BF3378 2.9e-70 putative peptide methionine sulfoxide reductase K07304:K07305; Psort location: Cytoplasmic, score: 8.96.
     
 0.422
Your Current Organism:
Faecalibacterium prausnitzii A2165
NCBI taxonomy Id: 411483
Other names: F. prausnitzii A2-165, Faecalibacterium prausnitzii A2-165
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