STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gph-2Glycoside/pentoside/hexuronide transporter; KEGG: eci:UTI89_C4210 2.1e-42 yicJ; hypothetical symporter YicJ K03292; Psort location: CytoplasmicMembrane, score: 10.00. (461 aa)    
Predicted Functional Partners:
EEU96112.1
Transcriptional regulator, TetR family; Psort location: Cytoplasmic, score: 8.96.
 
     0.903
ptbA
KEGG: stt:t0424 1.8e-31 crr; glucose-specific IIA component of PTS system K02777; Psort location: Cytoplasmic, score: 9.26.
 
      0.889
EEU96113.1
KEGG: cpe:CPE0831 4.0e-128 bgaL; beta-galactosidase K01190; Belongs to the glycosyl hydrolase 2 family.
 
    0.887
EEU96115.1
Alpha-galactosidase; KEGG: lic:LIC11140 8.1e-43 galA; alpha-galactosidase K07407; Psort location: Cytoplasmic, score: 8.96.
 
    0.841
nnrE
YjeF-like protein; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX; Belongs to the NnrE/AIBP family.
       0.574
EEU96111.1
Hypothetical protein.
       0.574
EEU97722.1
KEGG: cpe:CPE0831 4.2e-133 bgaL; beta-galactosidase K01190; Psort location: Cytoplasmic, score: 8.96; Belongs to the glycosyl hydrolase 2 family.
 
    0.485
Your Current Organism:
Faecalibacterium prausnitzii A2165
NCBI taxonomy Id: 411483
Other names: F. prausnitzii A2-165, Faecalibacterium prausnitzii A2-165
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.