STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mutLDNA mismatch repair domain protein; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. (716 aa)    
Predicted Functional Partners:
mutS
DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity.
 
 0.999
polA
KEGG: sth:STH848 2.4e-176 DNA polymerase I K02335.
   
 0.997
EEU98147.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
 0.992
EEU96279.1
Hypothetical protein.
  
 0.992
EEU96280.1
Hypothetical protein.
  
 0.992
EEU95773.1
MutS domain I protein; Psort location: Cytoplasmic, score: 8.96.
  
 0.992
EEU95097.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.96.
  
 0.992
dnaN
KEGG: ctc:CTC00093 2.6e-37 DNA polymerase III, beta chain K02338; Psort location: Cytoplasmic, score: 8.96; overlaps another CDS with the same product name.
   
 0.954
dnaN-2
KEGG: cac:CAC0002 2.2e-26 dnaN; DNA polymerase III beta subunit K02338; Psort location: Cytoplasmic, score: 8.96; overlaps another CDS with the same product name.
   
 0.954
miaA
tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family.
  
 0.942
Your Current Organism:
Faecalibacterium prausnitzii A2165
NCBI taxonomy Id: 411483
Other names: F. prausnitzii A2-165, Faecalibacterium prausnitzii A2-165
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.