STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEU95425.1Putative dipicolinic acid synthetase, A subunit; KEGG: btk:BT9727_3544 5.7e-26 dapA; dipicolinate synthase subunit A K06410. (264 aa)    
Predicted Functional Partners:
spoVFB
KEGG: bcz:BCZK3561 1.6e-39 dapB; dipicolinate synthase subunit B K06411; Psort location: Cytoplasmic, score: 8.96.
 
 
 0.998
EEU96754.1
Sporulation protein, YlmC/YmxH family; Psort location: Cytoplasmic, score: 8.96.
 
     0.740
EEU95999.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.719
spoIVA
Stage IV sporulation protein A; Psort location: Cytoplasmic, score: 8.96.
  
   
 0.705
EEU95832.1
KEGG: sth:STH3200 3.5e-25 spoIIE; stage II sporulation protein E K06382.
  
     0.699
EEU96132.1
Sigma-70, region 4; Psort location: Cytoplasmic, score: 8.96.
  
     0.688
EEU97915.1
Putative stage V sporulation protein AC; Psort location: CytoplasmicMembrane, score: 9.46.
  
   
 0.661
EEU97038.1
KEGG: bcc:BCc_016 2.8e-14 rpoH; RNA polymerase sigma-32 factor K00960; Psort location: Cytoplasmic, score: 8.96; Belongs to the sigma-70 factor family.
  
     0.659
EEU97919.1
Putative stage V sporulation protein AE; KEGG: mca:MCA1188 0.0047 inorganic H(+)-translocating pyrophosphatase K01507; Psort location: CytoplasmicMembrane, score: 9.46.
  
   
 0.655
EEU95673.1
Putative stage V sporulation protein T; Psort location: Cytoplasmic, score: 9.26.
  
     0.644
Your Current Organism:
Faecalibacterium prausnitzii A2165
NCBI taxonomy Id: 411483
Other names: F. prausnitzii A2-165, Faecalibacterium prausnitzii A2-165
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.