STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEU95343.1Rubrerythrin; KEGG: cpr:CPR_0938 4.9e-52 periplasmic [Fe] hydrogenase 1 K00532. (181 aa)    
Predicted Functional Partners:
EEU96687.1
4Fe-4S binding domain protein; KEGG: cno:NT01CX_0464 1.5e-91 Fe-hydrogenase large subunit family protein K00532.
 
 0.742
EEU97503.1
Metallo-beta-lactamase domain protein; KEGG: syn:sll0217 1.2e-33 potential FMN-protein; Psort location: Cytoplasmic, score: 8.96.
 
  
 0.563
EEU95344.1
LytTr DNA-binding domain protein; KEGG: rru:Rru_A1500 5.0e-08 signal transduction histidine kinase (STHK) with CheB and CheR activity K03412:K00575; Psort location: Cytoplasmic, score: 8.96.
       0.511
EEU95345.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: tte:TTE0562 9.5e-17 baeS2; sensory transduction histidine kinases K07706; Psort location: CytoplasmicMembrane, score: 7.88.
       0.511
EEU95342.1
Hypothetical protein; KEGG: pca:Pcar_2039 6.2e-12 ribonuclease, Rne/Rng family protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.490
hcp
Hydroxylamine reductase; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O.
  
  
 0.449
EEU96207.1
Glu/Leu/Phe/Val dehydrogenase, dimerization domain protein; KEGG: blo:BL0630 9.6e-182 gdhA; NADP-specific glutamate dehydrogenase K00262; Psort location: Cytoplasmic, score: 9.97; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
     
 0.427
EEU95341.1
RNA methyltransferase, TrmH family, group 3; KEGG: cpe:CPE2424 2.6e-53 probable tRNA/rRNA methyltransferase K03218; Psort location: Cytoplasmic, score: 8.96; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.
       0.408
nifJ
KEGG: cpr:CPR_2032 0. pyruvate-flavodoxin oxidoreductase K03737.
  
  
 0.402
EEU96038.1
Transcriptional regulator, Fur family; Psort location: Cytoplasmic, score: 8.96; Belongs to the Fur family.
  
  
 0.402
Your Current Organism:
Faecalibacterium prausnitzii A2165
NCBI taxonomy Id: 411483
Other names: F. prausnitzii A2-165, Faecalibacterium prausnitzii A2-165
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