STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEU94971.1STAS domain protein; KEGG: nfa:nfa42890 0.0093 echA18; putative enoyl-CoA hydratase/isomerase family protein K01692; Belongs to the anti-sigma-factor antagonist family. (104 aa)    
Predicted Functional Partners:
spoIIAB
Anti-sigma F factor; Binds to sigma F and blocks its ability to form an RNA polymerase holoenzyme (E-sigma F). Phosphorylates SpoIIAA on a serine residue. This phosphorylation may enable SpoIIAA to act as an anti- anti-sigma factor that counteracts SpoIIAB and thus releases sigma F from inhibition.
 
 
 0.999
sigF
KEGG: hpa:HPAG1_0089 1.9e-18 RNA polymerase sigma-80 factor K00960; Psort location: Cytoplasmic, score: 9.97; Belongs to the sigma-70 factor family.
 
  
 0.972
EEU95199.1
Putative stage II sporulation protein R.
  
   
 0.869
EEU97036.1
Putative sporulation transcriptional regulator SpoIIID.
  
   
 0.861
EEU95832.1
KEGG: sth:STH3200 3.5e-25 spoIIE; stage II sporulation protein E K06382.
  
  
 0.860
EEU96722.1
Putative sporulation transcription factor Spo0A; May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process.
 
  
 0.858
spoIIP
Stage II sporulation protein P.
  
   
 0.855
spoIVA
Stage IV sporulation protein A; Psort location: Cytoplasmic, score: 8.96.
  
   
 0.839
EEU97915.1
Putative stage V sporulation protein AC; Psort location: CytoplasmicMembrane, score: 9.46.
 
   
 0.835
EEU96088.1
Putative stage III sporulation protein AA; KEGG: reh:H16_A0711 0.00014 cpaF1; flp pilus assembly ATPase CpaF K01529; Psort location: Cytoplasmic, score: 8.96.
  
   
 0.834
Your Current Organism:
Faecalibacterium prausnitzii A2165
NCBI taxonomy Id: 411483
Other names: F. prausnitzii A2-165, Faecalibacterium prausnitzii A2-165
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.