STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR98958.1COG: COG4709 Predicted membrane protein; Psort location: CytoplasmicMembrane, score: 9.99. (203 aa)    
Predicted Functional Partners:
EDR98959.1
Transcriptional regulator, PadR family; COG: COG1695 Predicted transcriptional regulators; Psort location: Cytoplasmic, score: 8.87.
 
  
 0.947
EDR98957.1
Hypothetical protein.
       0.773
EDR95850.1
Transcriptional regulator, PadR family; COG: COG1695 Predicted transcriptional regulators.
 
  
 0.657
EDR98955.1
Acetyltransferase, GNAT family; KEGG: eci:UTI89_C4721 1.1e-13 yjdJ; hypothetical protein; COG: COG2388 Predicted acetyltransferase; Psort location: Cytoplasmic, score: 8.87.
       0.559
EDR98956.1
Tapetum specific protein TAP35/TAP44.
       0.556
EDR98953.1
KEGG: ret:RHE_PA00021 1.4e-29 putative transcriptional regulator protein, AsnC/GntR family K00863; COG: COG2390 Transcriptional regulator, contains sigma factor-related N-terminal domain; Psort location: Cytoplasmic, score: 8.87.
       0.545
EDR98954.1
Hypothetical protein.
       0.545
EDR98961.1
Sucrose-6-phosphate hydrolase; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family.
       0.475
EDR98962.1
PTS system sucrose-specific IIBC component; KEGG: lsa:LSA1792 7.5e-143 scrA; sucrose-specific phosphotransferase system, enzyme IIBCA K02808:K02809:K02810; COG: COG2190 Phosphotransferase system IIA components; Psort location: CytoplasmicMembrane, score: 10.00.
       0.472
EDR98960.1
Kinase, PfkB family; KEGG: ser:SERP1494 1.0e-74 fructokinase, putative K00847; COG: COG0524 Sugar kinases, ribokinase family; Psort location: Cytoplasmic, score: 9.98.
       0.471
Your Current Organism:
Anaerostipes caccae
NCBI taxonomy Id: 411490
Other names: A. caccae DSM 14662, Anaerostipes caccae DSM 14662
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