STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR98836.1Diguanylate cyclase (GGDEF) domain protein; KEGG: vfi:VFA0381 2.6e-09 sensory transduction protein kinase; COG: COG2199 FOG: GGDEF domain; Psort location: CytoplasmicMembrane, score: 9.99. (559 aa)    
Predicted Functional Partners:
EDR97789.1
Hypothetical protein; KEGG: eci:UTI89_C1702 6.4e-09 hypothetical protein; COG: COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain; Psort location: Cytoplasmic, score: 8.87.
 
 0.973
EDR96640.1
Diguanylate cyclase (GGDEF) domain protein; KEGG: shn:Shewana3_3829 7.1e-54 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) K01745; COG: COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain; Psort location: Cytoplasmic, score: 9.98.
 
 
 0.969
EDR96379.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: dde:Dde_1697 2.0e-60 periplasmic sensor hybrid histidine kinase; COG: COG2202 FOG: PAS/PAC domain; Psort location: CytoplasmicMembrane, score: 9.49.
 
 0.945
EDR97328.1
PAS domain S-box protein; KEGG: vfi:VF0494 5.7e-50 sensory transduction protein kinase; COG: COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain; Psort location: Cytoplasmic, score: 8.87.
 
 0.934
EDR97378.1
Diguanylate cyclase (GGDEF) domain protein; KEGG: vfi:VF0494 6.0e-14 sensory transduction protein kinase; COG: COG2199 FOG: GGDEF domain; Psort location: CytoplasmicMembrane, score: 9.99.
 
0.925
EDR96111.1
Repeat protein; KEGG: eci:UTI89_C1702 2.1e-29 hypothetical protein; COG: COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain; Psort location: Cytoplasmic, score: 8.87.
 
 
 0.919
EDR96941.1
Cyclic diguanylate phosphodiesterase (EAL) domain protein; KEGG: vfi:VF0494 1.1e-52 sensory transduction protein kinase; COG: COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain; Psort location: Cytoplasmic, score: 8.87.
 
 
 0.917
EDR97873.1
Diguanylate cyclase (GGDEF) domain protein; KEGG: ava:Ava_1777 1.7e-20 metal dependent phosphohydrolase, HD region with response regulator receiver modulation K07814; COG: COG2199 FOG: GGDEF domain; Psort location: Cytoplasmic, score: 8.87.
 
 0.910
EDR96761.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: vvy:VV2823 7.3e-65 signal transduction histidine kinase K07678; COG: COG0642 Signal transduction histidine kinase; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.896
EDR97531.1
Diguanylate cyclase (GGDEF) domain protein; KEGG: mca:MCA1246 1.3e-49 methyltransferase CheR, putative K03412:K00575; COG: COG2199 FOG: GGDEF domain; Psort location: CytoplasmicMembrane, score: 7.80.
 
 
 0.888
Your Current Organism:
Anaerostipes caccae
NCBI taxonomy Id: 411490
Other names: A. caccae DSM 14662, Anaerostipes caccae DSM 14662
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