STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR98618.1HTH domain protein; KEGG: spz:M5005_Spy_1083 4.9e-18 PTS system, mannitol (cryptic)-specific IIA component K03491; COG: COG3711 Transcriptional antiterminator; Psort location: CytoplasmicMembrane, score: 7.80. (657 aa)    
Predicted Functional Partners:
fruA
KEGG: lmf:LMOf2365_2720 6.4e-16 PTS system, fructose-specific, IIABC component K02768:K02769:K02770; COG: COG1299 Phosphotransferase system, fructose-specific IIC component; Psort location: Cytoplasmic, score: 8.87.
 
 
 0.985
fruA-2
KEGG: bld:BLi01654 9.2e-35 fruA; PTS fructose-specific enzyme IIABC component; RBL02167 K02768:K02769:K02770; COG: COG1299 Phosphotransferase system, fructose-specific IIC component; Psort location: Cytoplasmic, score: 8.87.
 
 
 0.983
EDR97350.1
Phosphotransferase system, EIIC; KEGG: stm:STM3255 7.7e-157 putative phosphotransferase system fructose-specific component IIBC K02769:K02770; COG: COG1299 Phosphotransferase system, fructose-specific IIC component; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.980
EDR95698.1
Phosphotransferase system, EIIC; KEGG: vfi:VFA0709 3.4e-163 PTS system, mannose-specific IIAB component K02768:K02769:K02770; COG: COG1299 Phosphotransferase system, fructose-specific IIC component; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.980
mtlA
KEGG: ecs:ECs4475 2.5e-158 mannitol-specific PTS system enzyme IIABC components K02798:K02799:K02800; COG: COG4668 Mannitol/fructose-specific phosphotransferase system, IIA domain; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.961
mtlA-4
KEGG: vvy:VV0505 6.1e-164 PTS system, mannitol-specific IIABC component K02798:K02799:K02800; COG: COG4668 Mannitol/fructose-specific phosphotransferase system, IIA domain; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.961
mtlA-5
EIICBA-Mtl; KEGG: eca:ECA0087 3.3e-140 mtlA; PTS system, mannitol-specific IIabc component K02798:K02799:K02800; COG: COG4668 Mannitol/fructose-specific phosphotransferase system, IIA domain; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.961
EDR99100.1
HTH domain protein; KEGG: spz:M5005_Spy_1083 1.0e-05 PTS system, mannitol (cryptic)-specific IIA component K03491; COG: COG3711 Transcriptional antiterminator; Psort location: Cytoplasmic, score: 8.87.
 
 
 0.944
EDR98962.1
PTS system sucrose-specific IIBC component; KEGG: lsa:LSA1792 7.5e-143 scrA; sucrose-specific phosphotransferase system, enzyme IIBCA K02808:K02809:K02810; COG: COG2190 Phosphotransferase system IIA components; Psort location: CytoplasmicMembrane, score: 10.00.
  
 0.941
EDR97267.1
PTS system, beta-glucoside-specific, IIABC component; KEGG: bld:BLi04200 1.0e-138 close homolog to BglP PTS enzyme IIBCA component; RBL02058 K02755:K02756:K02757; COG: COG2190 Phosphotransferase system IIA components; Psort location: CytoplasmicMembrane, score: 10.00.
  
 0.941
Your Current Organism:
Anaerostipes caccae
NCBI taxonomy Id: 411490
Other names: A. caccae DSM 14662, Anaerostipes caccae DSM 14662
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