STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR98680.1Hypothetical protein; COG: NOG18353 non supervised orthologous group. (124 aa)    
Predicted Functional Partners:
EDR98679.1
Hypothetical protein.
 
     0.959
EDR98681.1
Phage major tail protein, phi13 family; COG: NOG11304 non supervised orthologous group.
 
     0.958
EDR98682.1
Hypothetical protein; COG: NOG18352 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
 
     0.958
EDR98683.1
Putative phage protein, HK97 gp10 family; COG: NOG18351 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
 
     0.958
EDR98684.1
Putative phage head-tail adaptor.
 
     0.958
EDR98685.1
Phage DNA packaging protein; COG: NOG22900 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
 
     0.957
EDR98677.1
Phage tail tape measure protein, TP901 family; KEGG: ret:RHE_PF00265 6.0e-05 probable two-component sensor histidine kinase/response regulator hybrid protein; COG: COG5412 Phage-related protein; Psort location: CytoplasmicMembrane, score: 9.26.
 
     0.899
EDR98675.1
Phage minor structural protein, N-terminal domain protein; COG: COG3757 Lyzozyme M1 (1,4-beta-N-acetylmuramidase).
 
     0.821
EDR98686.1
COG: COG4653 Predicted phage phi-C31 gp36 major capsid-like protein; Psort location: Cytoplasmic, score: 8.87.
 
     0.819
EDR98688.1
Phage portal protein, HK97 family; COG: COG4695 Phage-related protein.
 
     0.758
Your Current Organism:
Anaerostipes caccae
NCBI taxonomy Id: 411490
Other names: A. caccae DSM 14662, Anaerostipes caccae DSM 14662
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.