STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR98701.1VRR-NUC domain protein; COG: NOG18350 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87. (93 aa)    
Predicted Functional Partners:
EDR98700.1
KEGG: lwe:lwe1660 9.3e-22 DNA/RNA helicase protein K01529; COG: COG0553 Superfamily II DNA/RNA helicases, SNF2 family; Psort location: Cytoplasmic, score: 8.87.
 
     0.958
EDR98703.1
Hypothetical protein; COG: NOG14267 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
 
     0.895
EDR98702.1
Phage/plasmid primase, P4 family domain protein; KEGG: hso:HS_0533 5.1e-05 phage DNA primase-like protein; COG: COG3378 Predicted ATPase; Psort location: Cytoplasmic, score: 8.87.
 
     0.882
EDR98705.1
KEGG: sak:SAK_0725 3.8e-226 prophage LambdaSa04, DNA polymerase K00961; COG: COG0749 DNA polymerase I - 3-5 exonuclease and polymerase domains; Psort location: Cytoplasmic, score: 8.87.
 
     0.881
EDR98698.1
HNH endonuclease domain protein; KEGG: eci:UTI89_C2987 5.3e-07 hypothetical protein K01157; COG: COG1403 Restriction endonuclease; Psort location: Cytoplasmic, score: 8.87.
 
     0.873
EDR98707.1
Hypothetical protein; COG: NOG11396 non supervised orthologous group.
 
     0.867
EDR98708.1
Hypothetical protein; COG: NOG07892 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
 
     0.865
EDR98709.1
Hypothetical protein; KEGG: dar:Daro_3676 0.0061 peptidase M, neutral zinc metallopeptidases, zinc-binding site K01256; COG: NOG23194 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
 
     0.860
EDR98699.1
Hypothetical protein; COG: NOG34472 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
 
     0.854
EDR98697.1
Hypothetical protein; COG: NOG11538 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
 
     0.841
Your Current Organism:
Anaerostipes caccae
NCBI taxonomy Id: 411490
Other names: A. caccae DSM 14662, Anaerostipes caccae DSM 14662
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.