STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR98749.1KEGG: cyb:CYB_2648 1.4e-13 HNH endonuclease domain protein K01157; COG: NOG17523 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87. (255 aa)    
Predicted Functional Partners:
EDR97382.1
KEGG: ctc:CTC01806 1.8e-219 5-methyltetrahydrofolate--homocysteine methyltransferase K00548; COG: COG1410 Methionine synthase I, cobalamin-binding domain; Psort location: Cytoplasmic, score: 8.87.
    
  0.793
EDR98748.1
Hypothetical protein; COG: NOG24465 non supervised orthologous group.
       0.785
EDR98751.1
Hypothetical protein.
       0.777
EDR98747.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.773
EDR98750.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.773
EDR98689.1
COG: COG4626 Phage terminase-like protein, large subunit; Psort location: Cytoplasmic, score: 8.87.
  
  
 0.618
EDR98693.1
Hypothetical protein; COG: NOG36032 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
  
  
 0.595
EDR97056.1
TraG/TraD family protein; COG: COG3505 Type IV secretory pathway, VirD4 components; Psort location: Cytoplasmic, score: 8.87.
   
 
 0.592
EDR97129.1
Hypothetical protein; COG: COG3505 Type IV secretory pathway, VirD4 components; Psort location: Cytoplasmic, score: 8.87.
   
 
 0.592
EDR97130.1
Hypothetical protein; COG: COG3505 Type IV secretory pathway, VirD4 components.
   
 
 0.592
Your Current Organism:
Anaerostipes caccae
NCBI taxonomy Id: 411490
Other names: A. caccae DSM 14662, Anaerostipes caccae DSM 14662
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.