STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR98762.1DNA-binding helix-turn-helix protein. (71 aa)    
Predicted Functional Partners:
EDR98761.1
BRO family, N-terminal domain protein; COG: COG3617 Prophage antirepressor.
       0.758
cinA
Competence/damage-inducible domain protein CinA; KEGG: mmu:319945 1.5e-10 Flad1; RFad1, flavin adenine dinucleotide synthetase, homolog (yeast) K00953; COG: COG1058 Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA; Psort location: Cytoplasmic, score: 8.87; Belongs to the CinA family.
    
 0.751
nadE
NAD+ synthase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
    
 0.708
nifJ
Pyruvate synthase; KEGG: cno:NT01CX_1854 0. nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K00168; COG: COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit.
  
 
 0.694
EDR98760.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.681
EDR97324.1
Hypothetical protein; COG: NOG21976 non supervised orthologous group.
  
 
 0.602
EDR98140.1
MORN repeat protein; KEGG: ath:At2g26420 0.00046 T9J22.9; 1-phosphatidylinositol-4-phosphate 5-kinase, putative / PIP kinase, putative / PtdIns(4)P-5-kinase, putative / diphosphoinositide kinase, putative K00889; COG: COG4642 Uncharacterized protein conserved in bacteria.
   
 0.600
EDR96781.1
Response regulator receiver domain protein; KEGG: ava:Ava_2028 8.9e-10 two component transcriptional regulator, LuxR family; COG: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; Psort location: Cytoplasmic, score: 8.87.
   
 0.600
EDR95677.1
Response regulator receiver domain protein; KEGG: ava:Ava_2028 2.4e-36 two component transcriptional regulator, LuxR family; COG: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; Psort location: Cytoplasmic, score: 9.98.
   
 0.600
alr
Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
    
 0.543
Your Current Organism:
Anaerostipes caccae
NCBI taxonomy Id: 411490
Other names: A. caccae DSM 14662, Anaerostipes caccae DSM 14662
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