STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR98358.1Transcriptional regulator, DeoR family; COG: COG1349 Transcriptional regulators of sugar metabolism; Psort location: Cytoplasmic, score: 8.87. (235 aa)    
Predicted Functional Partners:
EDR98357.1
KEGG: tte:TTE0342 7.5e-40 mtlD; mannitol-1-phosphate 5-dehydrogenase K00009; COG: COG0246 Mannitol-1-phosphate/altronate dehydrogenases; Psort location: Cytoplasmic, score: 8.87.
  
  
 0.668
EDR98360.1
KEGG: lsl:LSL_1894 2.8e-72 short chain dehydrogenase/reductase family protein K00068; COG: COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Psort location: Cytoplasmic, score: 9.65; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
  
 0.623
EDR98356.1
Hydrolase, NUDIX family; KEGG: tte:TTE1310 5.6e-35 mutT2; NTP pyrophosphohydrolases including oxidative damage repair enzymes K01515; COG: COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes; Psort location: Cytoplasmic, score: 8.87.
       0.615
rpiB
KEGG: msu:MS0383 4.7e-38 rpiB; ribose 5-phosphate isomerase RpiB K01808; COG: COG0698 Ribose 5-phosphate isomerase RpiB; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.608
rpiB-3
KEGG: msu:MS0383 3.2e-39 rpiB; ribose 5-phosphate isomerase RpiB K01808; COG: COG0698 Ribose 5-phosphate isomerase RpiB; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.608
rpiB-2
KEGG: tte:TTE0146 7.7e-54 rpiB; ribose 5-phosphate isomerase B K01808; COG: COG0394 Protein-tyrosine-phosphatase; Psort location: Cytoplasmic, score: 8.87; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
  
 
 0.605
fruA
KEGG: lmf:LMOf2365_2720 6.4e-16 PTS system, fructose-specific, IIABC component K02768:K02769:K02770; COG: COG1299 Phosphotransferase system, fructose-specific IIC component; Psort location: Cytoplasmic, score: 8.87.
  
  
 0.593
fruA-2
KEGG: bld:BLi01654 9.2e-35 fruA; PTS fructose-specific enzyme IIABC component; RBL02167 K02768:K02769:K02770; COG: COG1299 Phosphotransferase system, fructose-specific IIC component; Psort location: Cytoplasmic, score: 8.87.
  
  
 0.593
EDR97350.1
Phosphotransferase system, EIIC; KEGG: stm:STM3255 7.7e-157 putative phosphotransferase system fructose-specific component IIBC K02769:K02770; COG: COG1299 Phosphotransferase system, fructose-specific IIC component; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.593
EDR95698.1
Phosphotransferase system, EIIC; KEGG: vfi:VFA0709 3.4e-163 PTS system, mannose-specific IIAB component K02768:K02769:K02770; COG: COG1299 Phosphotransferase system, fructose-specific IIC component; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.593
Your Current Organism:
Anaerostipes caccae
NCBI taxonomy Id: 411490
Other names: A. caccae DSM 14662, Anaerostipes caccae DSM 14662
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