STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR97547.1Repeat protein; COG: COG4886 Leucine-rich repeat (LRR) protein. (919 aa)    
Predicted Functional Partners:
EDR97546.1
Hypothetical protein; KEGG: mma:MM2623 0.0071 exosome complex exonuclease 1 K00989.
       0.773
guaA
GMP synthase (glutamine-hydrolyzing) domain protein; Catalyzes the synthesis of GMP from XMP.
    
  0.769
EDR96363.1
Repeat protein; COG: COG4886 Leucine-rich repeat (LRR) protein; Psort location: Extracellular, score: 8.61.
 
  
 0.748
EDR95882.1
KEGG: bsu:BG10825 7.6e-31 cwlC; N-acetylmuramoyl-L-alanine amidase, peptidoglycan hydrolase, LytC amidase family K01448; COG: COG0860 N-acetylmuramoyl-L-alanine amidase; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.638
EDR97548.1
Hypothetical protein.
       0.623
EDR98070.1
Repeat protein; KEGG: chu:CHU_2852 0.00066 CHU large protein; candidate b-glycosidase, glycoside hydrolase family 8 protein K01238; COG: COG2730 Endoglucanase.
  
 
 0.597
EDR98570.1
Hypothetical protein; KEGG: bha:BH2080 8.2e-09 wprA; cell wall-associated protease precursor; COG: COG1404 Subtilisin-like serine proteases.
  
 
 0.578
EDR98961.1
Sucrose-6-phosphate hydrolase; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family.
  
 
 0.553
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
    
 0.550
EDR96385.1
KEGG: ter:Tery_5016 3.2e-199 glycogen debranching enzyme GlgX K02438; COG: COG1523 Type II secretory pathway, pullulanase PulA and related glycosidases; Psort location: Cytoplasmic, score: 9.65; Belongs to the glycosyl hydrolase 13 family.
    
 0.542
Your Current Organism:
Anaerostipes caccae
NCBI taxonomy Id: 411490
Other names: A. caccae DSM 14662, Anaerostipes caccae DSM 14662
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