STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR98004.1Alcohol dehydrogenase, iron-dependent; KEGG: tte:TTE0313 1.1e-91 uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family K00120; COG: COG1979 Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family; Psort location: Cytoplasmic, score: 9.98. (400 aa)    
Predicted Functional Partners:
EDR98007.1
Kinase, PfkB family; KEGG: gka:GK1957 7.1e-28 2-keto-3-deoxy-gluconate kinase K00874; COG: COG0524 Sugar kinases, ribokinase family; Psort location: Cytoplasmic, score: 9.98; Belongs to the carbohydrate kinase PfkB family.
 
     0.786
guaA
GMP synthase (glutamine-hydrolyzing) domain protein; Catalyzes the synthesis of GMP from XMP.
  
    0.779
EDR98005.1
KEGG: efa:EF2916 2.1e-19 hydrolase, haloacid dehalogenase-like family K01091; COG: COG0546 Predicted phosphatases; Psort location: Cytoplasmic, score: 8.87.
       0.778
rbsK-2
Putative ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
       0.775
EDR98006.1
KEGG: pmu:PM1767 1.6e-66 iunH; inosine-uridine preferring nucleoside hydrolase K01239; COG: COG1957 Inosine-uridine nucleoside N-ribohydrolase.
       0.775
trpF-2
KEGG: bja:bll8013 1.5e-27 putative phosphoribosylanthranilate isomerase K01817; COG: COG0135 Phosphoribosylanthranilate isomerase; Psort location: Cytoplasmic, score: 8.87; Belongs to the TrpF family.
       0.763
EDR98009.1
ABC transporter, ATP-binding protein; KEGG: rru:Rru_A2633 9.3e-26 ABC transporter component K06021; COG: COG1122 ABC-type cobalt transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49.
       0.754
EDR98010.1
KEGG: bmb:BruAb1_1935 5.4e-30 amino acid ABC transporter, ATP-binding protein K02028; COG: COG1122 ABC-type cobalt transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49.
       0.754
EDR98011.1
COG: COG0619 ABC-type cobalt transport system, permease component CbiQ and related transporters; Psort location: CytoplasmicMembrane, score: 9.99.
       0.729
EDR98012.1
Hypothetical protein; COG: NOG07916 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 9.99.
  
    0.654
Your Current Organism:
Anaerostipes caccae
NCBI taxonomy Id: 411490
Other names: A. caccae DSM 14662, Anaerostipes caccae DSM 14662
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