STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR98125.1TRAP transporter, DctQ-like membrane protein; COG: COG3090 TRAP-type C4-dicarboxylate transport system, small permease component; Psort location: Cytoplasmic, score: 8.87. (176 aa)    
Predicted Functional Partners:
EDR98124.1
TRAP transporter, DctM subunit; COG: COG1593 TRAP-type C4-dicarboxylate transport system, large permease component; Psort location: CytoplasmicMembrane, score: 9.99.
 
 0.998
EDR98123.1
TRAP transporter solute receptor, DctP family; COG: COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component.
 
  
 0.987
EDR98127.1
Transporter, major facilitator family protein; KEGG: gsu:GSU3029 0.0010 long-chain-fatty-acid--[acyl-carrier-protein] ligase / acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase K05939:K01909; COG: COG0477 Permeases of the major facilitator superfamily; Psort location: CytoplasmicMembrane, score: 10.00.
 
   
 0.804
EDR98130.1
Pyridine nucleotide-disulfide oxidoreductase; KEGG: lwe:lwe0460 2.4e-217 NADH:flavin oxidoreductase K00359; COG: COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases; Psort location: Cytoplasmic, score: 8.87.
 
    0.622
EDR98129.1
LysR substrate binding domain protein; KEGG: shn:Shewana3_3435 6.7e-17 transcriptional regulator, LysR family K06022; COG: COG0583 Transcriptional regulator; Psort location: Cytoplasmic, score: 9.98; Belongs to the LysR transcriptional regulatory family.
 
   
 0.571
EDR97929.1
Hypothetical protein; COG: NOG18027 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
    
 0.526
nagB
Glucosamine-6-phosphate deaminase; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion.
    
 0.526
nagB-2
Glucosamine-6-phosphate deaminase; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion.
    
 0.526
EDR96022.1
Putative glucosamine-6-phosphate deaminase; KEGG: cpe:CPE2434 1.1e-63 nagB; glucosamine-6-phosphate isomerase K02564; COG: COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase; Psort location: Cytoplasmic, score: 8.87.
    
 0.526
ilvD
KEGG: sat:SYN_01708 8.3e-192 dihydroxy-acid dehydratase K01687; COG: COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase; Psort location: Cytoplasmic, score: 8.87; Belongs to the IlvD/Edd family.
    
  0.520
Your Current Organism:
Anaerostipes caccae
NCBI taxonomy Id: 411490
Other names: A. caccae DSM 14662, Anaerostipes caccae DSM 14662
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